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psdA [2018-05-04 16:31:42]
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psdA [2018-05-04 16:31:42]

ABC transporter (ATP-binding protein) for the export of lipid II-binding lantibiotics, such as nisin and gallidermin
Locus
BSU34700
Isoelectric point
6.34
Molecular weight
28.89 kDa
Protein length
259 aa Sequence Blast
Gene length
777 bp Sequence Blast
Function
export of toxic peptides
Product
ABC transporter (ATP-binding protein)
Essential
no
Synonyms
yvcR

Genomic Context

      
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Categories containing this gene/protein

Gene

Coordinates
3,565,496 → 3,566,275

The protein

Structure

  • 1L2T (MJ0796 from Methanocaldococcus jannaschii , 44% identity) PubMed
  • Localization

  • membrane associated (via PsdB) PubMed
  • Expression and Regulation

    Operons

    Description

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon
  • Regulatory mechanism

  • PsdR: activation, PubMed, in PsdR regulon
  • Regulation

  • psdA: induced by nisin, gallidermin (PsdR) PubMed
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    Genes
    Description

    Regulation

  • psdA: induced by nisin, gallidermin (PsdR) PubMed
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    Biological materials

    Mutant

  • MGNA-B635 (yvcR::erm), available at the NBRP B. subtilis, Japan
  • BKE34700 (ΔpsdA::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTTCTGCTCCTCCTTTT, downstream forward: _UP4_TTGAGTGTGTTGGGAGGCGA
  • BKK34700 (ΔpsdA::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTTCTGCTCCTCCTTTT, downstream forward: _UP4_TTGAGTGTGTTGGGAGGCGA
  • References

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